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September 9, 2020 13:08
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IO functions wrapper
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#' | |
#' IO functions wrapper | |
#' | |
#' Write dataset to CSV | |
#' | |
#' @param dt | |
#' @param .file_name | |
#' @param .col_names | |
#' @param .eol | |
#' @param .append | |
#' @param .row_names | |
#' @param .quote | |
#' @param .sep | |
#' @param .fill_na | |
#' @param .encoding | |
#' @param .verbose | |
#' | |
io.write_to_csv <- function(dt, | |
.file_name, | |
.append = T, | |
.col_names = T, | |
.row_names = F, | |
.quote = T, | |
.sep = ",", | |
.fill_na = "", | |
.eol = "\n", | |
.encoding = "UTF-8", | |
.verbose = 0L) { | |
stopifnot( | |
is.data.frame(dt), | |
is.character(.file_name), | |
is.logical(.col_names), | |
is.logical(.row_names), | |
is.logical(.quote), | |
is.character(.sep), | |
is.character(.fill_na), | |
is.character(.eol), | |
is.character(.encoding), | |
is.numeric(.verbose) | |
) | |
if (.verbose != 0) | |
print(sprintf("Starting to write %s [%s]...", .file_name, format(object.size(dt), units = "KB"))) | |
write.table(dt, file = .file_name, append = .append, | |
quote = .quote, row.names = .row_names, col.names = .col_names, | |
na = .fill_na, sep = .sep, eol = .eol, | |
fileEncoding = .encoding) | |
} | |
testthat::test_that("io.write_to_csv test", { | |
data <- datasets::iris | |
io.write_to_csv(data, "write_iris.csv", .verbose = 1) | |
}) | |
#' Write to GZip file | |
#' | |
#' @param dt | |
#' @param .quote | |
#' @param .row_names | |
#' @param .file_name | |
#' @param .append | |
#' @param .col_names | |
#' @param .sep | |
#' @param .fill_na | |
#' @param .eol | |
#' @param .encoding | |
#' @param .verbose | |
#' | |
io.write_to_gzip <- function(dt, | |
.file_name, | |
.append = T, | |
.col_names = T, | |
.row_names = F, | |
.quote = T, | |
.sep = ",", | |
.fill_na = "", | |
.eol = "\n", | |
.encoding = "UTF-8", | |
.verbose = 0L) { | |
require(dplyr) | |
stopifnot( | |
is.data.frame(dt), | |
is.character(.file_name), | |
is.logical(.col_names), | |
is.logical(.row_names), | |
is.logical(.quote), | |
is.character(.sep), | |
is.character(.fill_na), | |
is.character(.eol), | |
is.character(.encoding), | |
is.numeric(.verbose) | |
) | |
tryCatch({ | |
gzFile <- gzfile(sprintf("%s.csv.gz", .file_name), "w") | |
if (.verbose != 0) | |
print(sprintf("Starting to write %s [%s]...", gzFile, format(object.size(dt), units = "KB"))) | |
write.csv(dt, file = gzFile, append = .append, | |
quote = .quote, row.names = .row_names, col.names = .col_names, | |
na = .fill_na, sep = .sep, eol = .eol, | |
fileEncoding = .encoding) | |
}, finally = { | |
close(gzFile) | |
}) | |
} | |
testthat::test_that("io.write_to_gzip test", { | |
data <- datasets::iris | |
io.write_to_gzip(data, "write_iris_zip", .verbose = 1) | |
}) |
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