Manodeep Sinha manodeep
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manodeep
/ replace-cdir-directives-with-dir-directives.sh
Created
July 22, 2025 05:17
Code to replace (known + feasible) !CDIR compiler directives to the equivalent !DIR$ directives
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| #!/bin/bash | |
| ## Taken from https://stackoverflow.com/a/28044986 | |
| # 1. Create ProgressBar function | |
| # 1.1 Input is currentState($1) and totalState($2) | |
| function ProgressBar { | |
| # Check if output is going to a tty | |
| if [ -t 1 ]; then | |
| # Output progress bar only if output is to tty |
manodeep
/ decompile-binaries.sh
Last active
June 2, 2025 00:40
Harshula's bash script to decompile binaries
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| #!/bin/bash | |
| # Copyright (C) 2023 Harshula Jayasuriya | |
| # https://gitlab.com/harshula/tools/decompile-binaries.sh | |
| # | |
| # This program is free software: you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published by | |
| # the Free Software Foundation, either version 3 of the License, or | |
| # (at your option) any later version. | |
| # |
manodeep
/ valgrind_filter.py
Created
May 19, 2025 03:59
A python code to filter out (gadi-specific) MPI library errors reported by valgrind
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| #!/usr/bin/env python | |
| # Written by Manodeep Sinha, May 2025 to filter out valgrind error logs. | |
| # Regex idea extended from https://stackoverflow.com/a/34407168 | |
| # Untested. Use at your own risk. - Manodeep Sinha, May 19, 2025 | |
| import fileinput | |
| import re | |
manodeep
/ aps_report_20250415_102000--esm1.6-dev_2025.04.html
Created
April 16, 2025 03:57
`APS` output for 208 cores for the latest AMIP release
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| <!DOCTYPE html><html lang="en"><head><title>APS report</title><meta http-equiv="Content-Type" content="text/html; charset=utf-8"><style type="text/css">@-webkit-keyframes filler{0%{width:0}}@-moz-keyframes filler{0%{width:0}}@keyframes filler{0%{width:0}}.icon[data-v-03c6e8ae]:after,.icon[data-v-03c6e8ae]:before{display:inline-block;width:1em;height:1em;line-height:1em;vertical-align:middle}.icon.menu[data-v-03c6e8ae]:after{content:url('data:image/svg+xml;charset=utf-8,<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 20 20" fill="%23fff"><path d="M3 3h14v3H3zM3 13h14v3H3zM3 8h14v3H3z"/></svg>')}.icon.comments[data-v-03c6e8ae]:after{content:url('data:image/svg+xml;charset=utf-8,<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 20 20" fill="%23fff"><path fill-rule="evenodd" clip-rule="evenodd" d="M16.5 9h1.25C18.44 9 19 8.44 19 7.75v-6.5C19 .56 18.44 0 17.75 0h-8.5C8.56 0 8 .56 8 1.25v6.5C8 8.44 8.56 9 9.25 9H14l2.5 2.5V9zm-1.982-1.5H9.5v-6h8v6h-2.25v.732l-.732-.732z"/><path d="M2.25 4H7v1.5H2.5v6h2.25v. |
manodeep
/ check_for_repro_multi_dirs.sh
Last active
June 20, 2025 05:22
Checking for reproducible atmosphere results between two experiments
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| #!/usr/bin/env bash | |
| ## Written by Manodeep Sinha (ACCESS-NRI, ANU) March 2025 | |
| ## Has made use of https://www.shellcheck.net/ to identify potential errors | |
| ## in the script. Other code fragments taken out of Stackoverflow and alike sites | |
| ## are noted inline. | |
| ## LICENSE: MIT | |
| echo "Setting up colors and font-styles ..." |
manodeep
/ Timings.py
Last active
August 10, 2023 04:11
— forked from synapticarbors/Timings.py
Attempt to create a faster version of a Euclidean pairwise distance method in cython using BLAS. Strategy for including BLAS taken from the Tokyo project.
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| import numpy as np | |
| from scipy.spatial.distance import cdist | |
| from distlib import pairwise_cython_blas, pairwise_cython, pairwise_cython_blas2 | |
| import timeit | |
| a = np.random.random(size=(10000,3)) | |
| loop = 1 | |
| repeat = 1 | |
| funcs = ['cdist(a,a)', 'pairwise_cython(a)', 'pairwise_cython_blas(a)', 'pairwise_cython_blas2(a)'] |
manodeep
/ compute_joint_wp_and_gmf_correlation_matrix_from_theory_with_ngal_from_mocks.pro
Created
November 8, 2021 04:54
IDL code to create the enormous correlation matrix plot from Sinha et al 2018
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| function return_left_edge, axis, index, value | |
| common tick_block, fixed_value_left_x, fixed_value_right_x | |
| if value lt n_elements(fixed_value_left_x) then begin | |
| tickmark = string_logexp(fixed_value_left_x[value]) | |
| endif else begin | |
| if value eq n_elements(fixed_right_x) then begin | |
| tickmark = string_logexp(fixed_value_right_x[-1]) | |
| endif else begin | |
| tickmark = 'N!Dgal!N' | |
| endelse |
manodeep
/ HPC-Distributed-Computing-HWSA2020.ipynb
Last active
July 5, 2020 04:10
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| [~/temp/astropy-64bit-power-of-2 @Manodeeps-MacBook-Pro] gcc -std=gnu11 -O2 -Wall -Wextra test.c | |
| test.c: In function 'naive_p2': | |
| test.c:227:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] | |
| while(result < n) { | |
| ^ | |
| [~/temp/astropy-64bit-power-of-2 @Manodeeps-MacBook-Pro] ./a.out | |
| Running in 64 bit mode | |
| Checking overflow bug | |
| nbytes = 9223372036854775807 nextp2 = -9223372036854775808 (unsigned) nextp2 = 9223372036854775808 | |
| nbytes = -1 nextp2 = 1 (unsigned) nextp2 = 1 |
manodeep
/ h5_dtype_sizes.c
Created
November 20, 2019 06:31
Getting size (in bytes) for some of the common HDF5 native datatypes
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| /* A code to print out the data size (in bytes) corresponding to the | |
| common HDF5 native datatypes | |
| Author: Manodeep Sinha | |
| Date: 20/11/2019 | |
| Compile with ` |
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