myschema.yaml

name: test-schema
id: http://example.org/test-schema
default_prefix: http://example.org/test-schema/

prefixes:
  linkml: https://w3id.org/linkml/
  
imports:
  - linkml:types
  

classes:
  Metadata:
    attributes:
      filename:
        range: string
      file_size:
        range: integer
      last_write_time:
        range: integer
      first_1000_bytes:
        range: string
      index_creation_time:
        range: integer
  Variant:
    attributes:
      chromosome:
        range: string
      position:
        range: integer
      rsid:
        range: string
      number_of_alleles:
        range: integer
      allele1:
        range: string
      allele2:
        range: string
      file_start_position:
        range: integer
      size_in_bytes:
        range: integer

### Running: linkml-sqldb load -s myschema.yaml --db data_chr21.bgen.bgi -o data_chr21.yaml --target-class Variant
### Creates a data_chr21.yaml file with only one record.
### data_chr21.bgen.bgi has been modified to have a variant id col